Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_48035051_48040197_R

Intron Information:

Intron Rank:

136744

Intron Class:

major

Intron Phase:

Intron Coordinates:

48035051 - 48040197

Intron Length:

5147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTTA

5'SS Class:

major

3'SS Sequence:

AATTTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TCAGACATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.3

38.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

74.9

0.56

0.9

71.9

38.2

Minor 5ss

42.8

-0.8

2.9

56.2

47.9

Minor BPS

48.6

-0

1.9

66.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022366

48034546 - 48040282

5737