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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48045414_48052241_R

Intron Information:

Intron Rank:

136743

Intron Class:

major

Intron Phase:

Intron Coordinates:

48045414 - 48052241

Intron Length:

6828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTATTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TCTCGTTGTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

72.5

0.56

1.2

63.4

Major PPT

75.1

0.56

44.4

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

42.9

-0.4

2.1

61.47

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017515

48034546 - 48052494

17949