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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48071960_48072396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48071960 - 48072396

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGATG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGTTGCTGACCA

Flanking Amino Acid:

SEECLETLRGDERIISILRH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

77.5

0.62

0.8

71.7

32.7

Minor 5ss

34.8

-1.7

3.4

47.9

47.8

Minor BPS

49.6

-0

2.2

69.02

43.1

Associated Gene:

Gene:

CHGA

Ensembl Gene ID:

ENSAPLG00000009162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009553

48071869 - 48076770

4902

ENSAPLT00000043699

48071869 - 48075672

3804