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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48072466_48073065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48072466 - 48073065

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TTACCTGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

CTTTTGTTACCT

Flanking Amino Acid:

LKELQEIAAQGANERTQQQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

71.4

0.53

1.2

63.4

Major PPT

66.7

0.38

61.2

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

53.3

0.18

2.3

78.66

44.1

Associated Gene:

Gene:

CHGA

Ensembl Gene ID:

ENSAPLG00000009162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043699

48071869 - 48075672

3804

ENSAPLT00000009553

48071869 - 48076770

4902