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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48073165_48074156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48073165 - 48074156

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCACTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGCTCCTCACTC

Flanking Amino Acid:

ESQNDENKQRDAAWQHAEEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.59

0.8

31.1

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

51.8

0.04

1.9

63.09

42.8

Associated Gene:

Gene:

CHGA

Ensembl Gene ID:

ENSAPLG00000009162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043699

48071869 - 48075672

3804

ENSAPLT00000009553

48071869 - 48076770

4902