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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48074664_48075076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48074664 - 48075076

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTATC

5'SS Class:

major

3'SS Sequence:

AATGCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TTGTGCTCACTG

Flanking Amino Acid:

VGAEEMQGEDSNDDALGFGK

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

70.5

40.2

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

75.2

0.57

0.9

70.5

40.2

Minor 5ss

41.4

-1

59.7

38.9

Minor BPS

45.1

-0.5

2.2

54.94

46.7

Associated Gene:

Gene:

CHGA

Ensembl Gene ID:

ENSAPLG00000009162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009553

48071869 - 48076770

4902

ENSAPLT00000043699

48071869 - 48075672

3804