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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48224760_48225273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48224760 - 48225273

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCCG

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAC

U12 Branch Point Sequence:

GCCCCTCCAACC

Flanking Amino Acid:

SDHERCSYAQGAVKRQALYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

44.7

Major BPS

49.8

-0

1.2

34.3

Major PPT

78.7

0.65

0.7

73.3

24.9

Minor 5ss

24.2

-3

3.2

29.7

43.3

Minor BPS

44.1

-0.4

1.8

49.43

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464