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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48225759_48226976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48225759 - 48226976

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TATATCGAAACA

Flanking Amino Acid:

FKNLQCKLLPEKGKVNSGNK

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

65.3

42.2

Major BPS

64.1

0.35

1.2

45.5

Major PPT

76.6

0.6

0.7

69.3

31.3

Minor 5ss

28.6

-2.5

2.8

41.8

Minor BPS

46.9

-0.2

2.3

64.61

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464