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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48227073_48227872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48227073 - 48227872

Intron Length:

800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ACCATTCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

ATGCTAATAACG

Flanking Amino Acid:

KRPYPDPDDEIPDEMIQCIV

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

63.8

0.31

0.9

55.2

39.8

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

-0.4

1.9

53.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464