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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48227927_48229154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48227927 - 48229154

Intron Length:

1228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTGACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTCAA

U12 Branch Point Sequence:

TTCCTTTTGACA

Flanking Amino Acid:

IVCEDWFHGRHLGAIPPESG

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

63.3

0.33

1.2

39.8

Major PPT

81.4

0.71

0.9

79.1

32.9

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

64.6

0.45

1.2

70.86

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464