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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48229261_48230874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48229261 - 48230874

Intron Length:

1614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGCATCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GTATTTTCACTT

Flanking Amino Acid:

FLWAYAPQLAVPALTKATSL

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

68.2

0.41

0.9

58.7

42.7

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

47.9

-0

1.7

64.96

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464