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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48231063_48231563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48231063 - 48231563

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTAATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGCTTTTAATT

Flanking Amino Acid:

STSSGSACPEIVNKSEEPAC

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

74.5

39.2

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

63.6

0.5

1.3

72.08

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028622

48224558 - 48234021

9464

ENSAPLT00000037102

48224558 - 48233850

9293