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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48231696_48232099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48231696 - 48232099

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CATTGTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AGTTTTGTAATT

Flanking Amino Acid:

SKLCTCADCLKMYSELEVPF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

77.6

0.62

0.9

69.5

41.3

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

54.7

0.23

74.04

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464