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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48232263_48232919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48232263 - 48232919

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATACA

5'SS Class:

major

3'SS Sequence:

CTTCCCCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

CTGTGTTTACCC

Flanking Amino Acid:

NRVQQVELICEYNDLKTELT

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

75.7

33.2

Major BPS

71.4

0.53

1.1

63.4

Major PPT

76.9

0.6

0.8

29.9

Minor 5ss

35.5

-1.6

2.7

40.3

40.5

Minor BPS

48.8

-0.1

2.1

61.04

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028622

48224558 - 48234021

9464

ENSAPLT00000037102

48224558 - 48233850

9293