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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48232982_48233757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48232982 - 48233757

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TGTACCACAACT

Flanking Amino Acid:

YLRRFADEGTVVKREDIQHF

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.3

43.2

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

69.7

0.44

66.6

39.5

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

57.1

0.3

1.9

79.65

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037102

48224558 - 48233850

9293

ENSAPLT00000028622

48224558 - 48234021

9464