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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48243705_48245364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48243705 - 48245364

Intron Length:

1660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

GACTTCCTACTT

Flanking Amino Acid:

LSDAAAELLQNPHKFFPDER

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

58.9

0.22

1.3

58.4

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

46.7

-0.1

1.9

61.86

42.4

Associated Gene:

Gene:

BTBD7

Ensembl Gene ID:

ENSAPLG00000010048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045234

48238977 - 48273628

34652

ENSAPLT00000010466

48238977 - 48273628

34652