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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48245544_48248464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48245544 - 48248464

Intron Length:

2921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTGTCCTCAATT

Flanking Amino Acid:

PPSVIANEIPVPNLLVVKEM

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

72.9

0.52

0.9

62.4

39.8

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

75.7

0.88

1.5

88.28

37.2

Associated Gene:

Gene:

BTBD7

Ensembl Gene ID:

ENSAPLG00000010048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010466

48238977 - 48273628

34652

ENSAPLT00000045234

48238977 - 48273628

34652