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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48248655_48250111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48248655 - 48250111

Intron Length:

1457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

AGTGCCTTCATG

Flanking Amino Acid:

RQPTWQADGKSVLDEMMVEQ

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

0.62

1.1

77.2

Major PPT

72.6

0.51

41.2

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

51.2

-0.1

1.9

58.15

43.9

Associated Gene:

Gene:

BTBD7

Ensembl Gene ID:

ENSAPLG00000010048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045234

48238977 - 48273628

34652