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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48250226_48250458_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48250226 - 48250458

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCGAGACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TTTGTCGAAATT

Flanking Amino Acid:

LFSPYVEEAKILMKFHRKQS

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

82.7

29.3

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

59.4

0.21

1.2

45.1

Minor 5ss

37.1

-1.5

49.4

46.4

Minor BPS

47.7

-0.1

2.3

74.4

43.5

Associated Gene:

Gene:

BTBD7

Ensembl Gene ID:

ENSAPLG00000010048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045234

48238977 - 48273628

34652