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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48267657_48273442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48267657 - 48273442

Intron Length:

5786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGTGTTTAATT

Flanking Amino Acid:

GNSQAQQTFIGTSSYSHQGY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.5

0.71

0.9

77.9

36.6

Minor 5ss

38.8

-1.3

52.9

44.3

Minor BPS

63.6

0.5

1.7

77.6

39.8

Associated Gene:

Gene:

BTBD7

Ensembl Gene ID:

ENSAPLG00000010048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010466

48238977 - 48273628

34652

ENSAPLT00000045234

48238977 - 48273628

34652