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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48301147_48309318_F

Intron Information:

Intron Rank:

144051

Intron Class:

major

Intron Phase:

Intron Coordinates:

48301147 - 48309318

Intron Length:

8172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTCCTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.56

0.9

74.4

34.1

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

83.1

1.12

93.31

27.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036947

48300665 - 48310116

9452