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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48309396_48309667_R

Intron Information:

Intron Rank:

135972

Intron Class:

major

Intron Phase:

Intron Coordinates:

48309396 - 48309667

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCTCTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

65.6

40.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

88.3

0.86

0.6

84.3

23.8

Minor 5ss

31.9

-2.1

3.4

46.3

Minor BPS

64.6

0.45

1.6

76.23

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031572

48307000 - 48320056

13057