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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48651106_48651603_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48651106 - 48651603

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCGCG

5'SS Class:

weak_major

3'SS Sequence:

TCACGCTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

AAACTCATAATC

Flanking Amino Acid:

IERPVRRSLKTPEEIERLTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

53.3

44.1

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

65.7

0.35

1.1

60.4

40.2

Minor 5ss

48.3

-0.2

2.9

65.3

46.1

Minor BPS

49.7

-0

1.5

57.4

34.2

Associated Gene:

Gene:

PPP4R4

Ensembl Gene ID:

ENSAPLG00000011376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047016

48650998 - 48723056

72059

ENSAPLT00000018283

48650998 - 48723056

72059

ENSAPLT00000011863

48650998 - 48743237

92240