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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48685056_48686321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48685056 - 48686321

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGCT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TAACATATAACC

Flanking Amino Acid:

ILQNLEHRDAGVSNAWLETL

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

72.6

35.5

Major BPS

70.4

0.51

67.1

39.4

Major PPT

82.3

0.73

0.9

79.8

32.3

Minor 5ss

27.3

-2.6

3.4

39.4

Minor BPS

48.5

-0.1

1.7

60.49

37.6

Associated Gene:

Gene:

PPP4R4

Ensembl Gene ID:

ENSAPLG00000011376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011863

48650998 - 48743237

92240

ENSAPLT00000047016

48650998 - 48723056

72059

ENSAPLT00000033194

48651281 - 48723056

71776

ENSAPLT00000018283

48650998 - 48723056

72059