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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48714279_48716758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48714279 - 48716758

Intron Length:

2480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTAATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAATTATTAATT

Flanking Amino Acid:

LDRMDISLDAEQLEKEKQQS

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.2

0.61

0.9

74.4

40.3

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

61.5

0.44

1.5

73.6

36.8

Associated Gene:

Gene:

PPP4R4

Ensembl Gene ID:

ENSAPLG00000011376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047016

48650998 - 48723056

72059