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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48752552_48753807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48752552 - 48753807

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATGAC

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

TGAPELKVSKVVHKAALDVD

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

49.7

-0

1.2

43.4

39.2

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012423

48750444 - 48762846

12403