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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48787874_48788438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48787874 - 48788438

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATCCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

VSNWSQSLEERPIELYLPKF

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

66.7

44.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

40.2

-1.1

3.1

57.6

46.4

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034576

48787721 - 48793408

5688

ENSAPLT00000012631

48784169 - 48790050

5882