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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48802485_48803911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48802485 - 48803911

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATACAATTACAT

Flanking Amino Acid:

MVLVNYIYFKAYWENPFNVK

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

73.9

0.59

30.2

Major PPT

71.9

0.49

1.1

74.9

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

42.9

-0.4

60.99

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012695

48798629 - 48804581

5953