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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48841916_48842725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48841916 - 48842725

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTTCCCCACAG

Flanking Amino Acid:

SGSRDLQVSQAIHKALLEVD

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

82.2

0.73

0.7

76.7

25.5

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

45.8

-0.4

2.2

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012904

48841340 - 48845361

4022