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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48961786_48961988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48961786 - 48961988

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CATGCGAAAGCC

Flanking Amino Acid:

AQQCSCVPPAGYEGTGSVLM

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

70.9

0.47

0.9

65.8

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

33.9

-1.2

2.4

43.83

43.9

Associated Gene:

Gene:

GSC

Ensembl Gene ID:

ENSAPLG00000012404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012906

48961004 - 48962316

1313