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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49159788_49160895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49159788 - 49160895

Intron Length:

1108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTCTCTTATCA

Flanking Amino Acid:

TDVSENLPIIRNKKDMEASE

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.8

0.58

0.9

73.5

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

63.8

0.43

1.6

73.41

38.1

Associated Gene:

Gene:

CLMN

Ensembl Gene ID:

ENSAPLG00000012967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013492

49159634 - 49176129

16496