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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49160958_49162029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49160958 - 49162029

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TTTTTGTTTAAG

Flanking Amino Acid:

RQRLPNTSEKEIFGENNQTM

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

81.6

0.71

86.9

31.1

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

46.9

-0.3

2.4

63.92

43.8

Associated Gene:

Gene:

CLMN

Ensembl Gene ID:

ENSAPLG00000012967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013492

49159634 - 49176129

16496