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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49167065_49168073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49167065 - 49168073

Intron Length:

1009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCTGTCTCCACA

Flanking Amino Acid:

LGVPRLLEPEDIMVESPDEH

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

78.2

0.64

0.8

72.3

32.5

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

47.6

-0.1

2.1

62.43

44.3

Associated Gene:

Gene:

CLMN

Ensembl Gene ID:

ENSAPLG00000012967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013492

49159634 - 49176129

16496