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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4918261_4932454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4918261 - 4932454

Intron Length:

14194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CAATTTCTAACC

Flanking Amino Acid:

QEEILEINRAGLGPMHARF*

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.2

0.64

0.8

72.5

32.2

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

52.3

0.05

1.7

60.47

38.7

Associated Gene:

Gene:

KCNC1

Ensembl Gene ID:

ENSAPLG00000005789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019425

4833645 - 4932483

98839