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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4918261_4951599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4918261 - 4951599

Intron Length:

33339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCTGCTTTCACA

Flanking Amino Acid:

QEEILEINRAGKHQWYFL*

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

80.8

0.69

0.8

75.3

33.1

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

58.8

0.27

1.9

70.26

42.8

Associated Gene:

Gene:

KCNC1

Ensembl Gene ID:

ENSAPLG00000005789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025632

4833645 - 4952407

118763