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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49283695_49285496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49283695 - 49285496

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

SHLKDYTSLPSLRSSEEPDR

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

67.1

38.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

32.1

-2

3.4

43.2

44.5

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019