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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49285647_49286199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49285647 - 49286199

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTGCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ACTGGTGTAACT

Flanking Amino Acid:

EIKARRNKLEKLQARVPDGQ

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

25.8

Major BPS

74.6

0.61

65.6

41.4

Major PPT

77.1

0.61

0.9

70.1

35.8

Minor 5ss

42.5

-0.8

2.8

45.4

Minor BPS

44.9

-0.3

2.4

65.07

46.1

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019