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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49286356_49286531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49286356 - 49286531

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTAACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TGTTCTGTAACG

Flanking Amino Acid:

SRLLDPTYKQERIGEGQNTS

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

67.1

0.38

0.9

37.3

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

62.1

0.24

2.1

71.8

41.3

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019