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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49286656_49287589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49286656 - 49287589

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTGCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTCACTGAACT

Flanking Amino Acid:

SWRSLKKMTAGILKRRRLNR

Intron Amino Acid Position:

914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

0.85

0.9

39.9

Major PPT

63.5

0.3

1.2

63.8

46.3

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

62.5

0.47

1.7

79.84

41.4

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019