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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49287754_49288481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49287754 - 49288481

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

ATACCTAGAAGT

Flanking Amino Acid:

STESRMADLERWIAEFPDKE

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

76.8

33.7

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

73.3

0.52

69.1

41.8

Minor 5ss

27.4

-2.6

2.7

30.4

Minor BPS

44.6

-0.3

1.9

62.93

40.6

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019