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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49288644_49289633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49288644 - 49289633

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

TTATCATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATCA

Flanking Amino Acid:

DAQAIERSLKMMIQQTEDHV

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.8

77.8

35.2

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

61.6

0.36

1.5

69.92

36.4

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019