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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49289769_49290539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49289769 - 49290539

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTAC

5'SS Class:

major

3'SS Sequence:

TTTTCCACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

ATAGCCTTTACA

Flanking Amino Acid:

GKKTQLQRLQMIQDDLAELA

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

71.9

34.4

Major BPS

72.8

0.57

30.3

Major PPT

84.3

0.77

0.8

78.8

28.3

Minor 5ss

38.8

-1.3

3.1

52.1

45.1

Minor BPS

61.9

0.37

1.8

70.49

41.2

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019