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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49290684_49290940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49290684 - 49290940

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

RLLQTKSKLQNLISQHEDFD

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.3

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.68

0.7

73.4

31.6

Minor 5ss

-0.8

58.3

46.6

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019