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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49291124_49291884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49291124 - 49291884

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCAAAC

5'SS Class:

major

3'SS Sequence:

TGTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTGTTATGATT

Flanking Amino Acid:

SPEPSLAQIEVALAESSQFK

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

40.1

Major BPS

84.6

0.86

41.2

Major PPT

83.6

0.76

0.7

82.3

29.8

Minor 5ss

37.9

-1.4

3.2

51.4

45.5

Minor BPS

51.3

0.12

1.7

74.61

36.9

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019