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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49295660_49296447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49295660 - 49296447

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCTTAAA

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTATGTAACT

Flanking Amino Acid:

SAEDKLKALKEITKDIRRGG

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.4

67.2

39.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

88.7

0.87

0.6

84.3

23.6

Minor 5ss

29.5

-2.4

2.7

34.3

41.1

Minor BPS

57.1

0.3

2.2

81.57

39.9

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019