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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49296610_49300633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49296610 - 49300633

Intron Length:

4024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACCGA

5'SS Class:

major

3'SS Sequence:

TCTCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTCTTGTTACA

Flanking Amino Acid:

EYEGIKEEAQSRVKLLEKIT

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

53.3

45.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

84.6

0.78

0.8

79.1

32.9

Minor 5ss

35.5

-1.6

3.3

47.4

Minor BPS

44.8

-0.4

2.2

59.46

40.6

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019