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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49300944_49301397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49300944 - 49301397

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATTTAACT

Flanking Amino Acid:

ETAIYITHCHSRIEWVWLHW

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

71.7

40.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

74.5

0.55

0.8

69.9

29.6

Minor 5ss

31.3

-2.1

39.6

45.7

Minor BPS

75.2

0.87

1.4

90.66

32.3

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013532

49260323 - 49325341

65019

ENSAPLT00000025753

49277784 - 49325341

47558