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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49301571_49304268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49301571 - 49304268

Intron Length:

2698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAAAC

Flanking Amino Acid:

ALEARLRETEKICALEPEGS

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.9

0.58

0.9

69.4

36.6

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

56.1

0.17

1.6

67.06

38.8

Associated Gene:

Gene:

SYNE3

Ensembl Gene ID:

ENSAPLG00000012970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025753

49277784 - 49325341

47558

ENSAPLT00000013532

49260323 - 49325341

65019