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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49550757_49561670_F

Intron Information:

Intron Rank:

142065

Intron Class:

major

Intron Phase:

Intron Coordinates:

49550757 - 49561670

Intron Length:

10914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

ACCCTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TGTACCCTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

0.54

0.9

69.9

34.5

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

49.6

0.05

2.1

74.4

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022859

49549547 - 49563017

13471