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Intron Name: Anas_platyrhynchos_platyrhynchos_5_49568081_49568663_R

Intron Information:

Intron Rank:

143616

Intron Class:

major

Intron Phase:

Intron Coordinates:

49568081 - 49568663

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TATCTCATACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.7

31.5

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.83

0.7

85.9

27.9

Minor 5ss

37.1

-1.5

2.6

47.1

41.2

Minor BPS

46.9

-0.1

1.9

68.85

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028942

49566150 - 49576518

10369